Publications

Pycro-Manager: open-source software for customized and reproducible microscope control

Henry Pinkard, Nico Stuurman, Ivan E. Ivanov, Nicholas M. Anthony, Wei Ouyang, Bin Li, Bin Yang, Mark A. Tsuchida, Bryant Chhun, Grace Zhang, Ryan Mei, Michael Anderson, Douglas P. Shepherd, Ian Hunt-Isaak, Raymond L. Dunn, Wiebke Jahr, Saul Kato, Loïc A. Royer, Jay R. Thiagarajah, Kevin W. Eliceiri, Emma Lundberg, Shalin B. Mehta & Laura Waller
Nature Methods
March 5, 2021

Automated end-to-end deep learning framework for classification and tumor localization from native non-stained pathology images

Akram Bayat, Connor Anderson, Pratik Shah
SPIE Digital Library —  Proceedings Volume 11596, SPIE Medical Imaging 2021: Image Processing
February 15, 2021

A community based approach to universal energy access

Tam Kemabonta, Daniel M.Kammen
The Electricity Journal
February 13, 2021

Examining the Global Spread of COVID-19 Misinformation

Sophie Nightingale, Hany Farid
arXiv.org
January 27, 2021

The LHC Olympics 2020: A Community Challenge for Anomaly Detection in High Energy Physics

Gregor Kasieczka (ed), Benjamin Nachman (ed), David Shih (ed), Oz Amram, Anders Andreassen, Kees Benkendorfer, Blaz Bortolato, Gustaaf Brooijmans, Florencia Canelli, Jack H. Collins, Biwei Dai, Felipe F. De Freitas, Barry M. Dillon, Ioan-Mihail Dinu, Zhongtian Dong, Julien Donini, Javier Duarte, D. A. Faroughy, Julia Gonski, Philip Harris, Alan Kahn, Jernej F. Kamenik, Charanjit K. Khosa, Patrick Komiske, Luc Le Pottier, Pablo Martín-Ramiro, Andrej Matevc, Eric Metodiev, Vinicius Mikuni, Inês Ochoa, Sang Eon Park, Maurizio Pierini, Dylan Rankin, Veronica Sanz, Nilai Sarda, Uroš Seljak, Aleks Smolkovic, George Stein, Cristina Mantilla Suarez, Manuel Szewc, Jesse Thaler, Steven Tsan, Silviu-Marian Udrescu, Louis Vaslin, Jean-Roch Vlimant, Daniel Williams, Mikaeel Yunus
arXiv
January 20, 2021

A reusable pipeline for large-scale fiber segmentation on unidirectional fiber beds using fully convolutional neural networks

Alexandre Fioravante de Siqueira, Daniela Mayumi Ushizima, Stéfan van der Walt
arXiv.org
January 15, 2021

Field performance and public health response using the BinaxNOW TM Rapid SARS-CoV-2 antigen detection assay during community-based testing

Genay Pilarowski, Carina Marquez, Luis Rubio, James Peng, Jackie Martinez, Douglas Black, Gabriel Chamie, Diane Jones, Jon Jacobo, Valerie Tulier-Laiwa, Susana Rojas, Susy Rojas, Chesa Cox, Maya Petersen, Joe DeRisi, Diane V Havlir
Clinical Infectious Diseases
December 26, 2020

Evaluating cross-sectoral impacts of climate change and adaptations on the energy-water nexus: a framework and California case study

Julia K Szinai, Ranjit Deshmukh, Daniel M. Kammen and Andrew D Jones
Environmental Research Letters
December 16, 2020

Spatial transcriptional signatures define margin morphogenesis along the proximal–distal and medio-lateral axes in tomato (Solanum lycopersicum) leaves

Ciera C Martinez, Siyu Li, Margaret R Woodhouse, Keiko Sugimoto, Neelima R Sinha
The Plant Cell
December 2, 2020

Pages