Publications

Natural stings: alternative health services selling distrust about vaccines on YouTube

Dayane Machado, Alexandre de Siqueira, Leda Gitahy
Frontiers, SocArXiv
July 1, 2020

Translating gene drive science to promote linguistic diversity in community and stakeholder engagement

Cynthia Cheung , Stephanie Gamez , Rebeca Carballar-Lejarazú , Victor Ferman , Váleri N. Vásquez , Gerard Terradas , Judy Ishikawa , Cynthia E. Schairer , Ethan Bier , John M. Marshall , Anthony A. James , Omar S. Akbari & Cinnamon S. Bloss
Global Public Health
June 26, 2020

COVID-19 pandemic reveals the peril of ignoring metadata standards

Lynn M. Schriml, Maria Chuvochina, Neil Davies, Emiley A. Eloe-Fadrosh, Robert D. Finn, Philip Hugenholtz, Christopher I. Hunter, Bonnie L. Hurwitz, Nikos C. Kyrpides, Folker Meyer, Ilene Karsch Mizrachi, Susanna-Assunta Sansone, Granger Sutton, Scott Tighe and Ramona Walls
Scientific Data
June 19, 2020

Curating a COVID-19 data repository and forecasting county-level death counts in the United States

Nick Altieri, Rebecca Barter, James Duncan, Raaz Dwivedi, Karl Kumbier, Xiao Li, Robert Netzorg, Briton Park, Chandan Singh, Yan Shuo Tan, Tiffany Tang, Yu Wang, Bin Yu
Berkeley Statistics. Pending at arXiv.org.
May 16, 2020

Integrative genomic analysis in African American children with asthma finds 3 novel loci associated with lung function

Pagé C. Goddard, Kevin L. Keys, Angel C.Y. Mak, Eunice Yujung Lee, Amy K. Liu, Lesly-Anne Samedy-Bates, Oona Risse-Adams, María G. Contreras, Jennifer R. Elhawary, Donglei Hu, Scott Huntsman, Sam S. Oh, Sandra Salazar, Celeste Eng, Blanca E. Himes, Marquitta J. White, Esteban G. Burchard
bioRxiv.org
May 3, 2020

Total COVID-19 Mortality in Italy: Excess Mortality and Age Dependence through Time-Series Analysis

Chirag Modi, Vanessa Boehm, Simone Ferraro, George Stein, Uros Seljak
medRxiv.org
April 20, 2020

One size does not fit all: Customizing MCMC methods for hierarchical models using NIMBLE

Lauren C. Ponisio, Perry de Valpine, Nicholas Michaud, Daniel Turek
Ecology and Evolution
February 14, 2020

Veridical data science

Bin Yu and Karl Kumbier
Proceedings of the National Academy of Sciences (PNAS)
February 13, 2020

SciPy 1.0: fundamental algorithms for scientific computing in Python

Pauli Virtanen, Ralf Gommers, Travis E. Oliphant, Matt Haberland, Tyler Reddy, David Cournapeau, Evgeni Burovski, Pearu Peterson, Warren Weckesser, Jonathan Bright, Stéfan J. van der Walt, Matthew Brett, Joshua Wilson, K. Jarrod Millman, Nikolay Mayorov, Andrew R. J. Nelson, Eric Jones, Robert Kern, Eric Larson, C J Carey, İlhan Polat, Yu Feng, Eric W. Moore, Jake VanderPlas, Denis Laxalde, Josef Perktold, Robert Cimrman, Ian Henriksen, E. A. Quintero, Charles R. Harris, Anne M. Archibald, Antônio H. Ribeiro, Fabian Pedregosa, Paul van Mulbregt & SciPy 1.0 Contributors
Nature Methods
February 3, 2020

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