Publications

Deep learning for single-shot autofocus microscopy

Henry Pinkard, Zachary Phillips, Arman Babakhani, Daniel A. Fletcher, Laura Waller
Optica
June 5, 2019

SkyPortal: An Astronomical Data Platform

Stéfan J. van der Walt, Arien Crellin-Quick, and Joshua S. Bloom
Journal of Open Source Software (JOSS)
May 12, 2019

An Iterated Local Search Algorithm for Cell Nuclei Detection from Pap Smear Images

Débora N. Diniz, Marcone J. F. Souza, Claudia M. Carneiro, Daniela M. Ushizima, Fátima N. S. de Medeiros Sombra, Paulo H. C. Oliveira and Andrea G. C. Bianchi
Proceedings of the 21st International Conference on Enterprise Information Systems
May 3, 2019

Proximal Distance Algorithms: Theory and Examples

Kevin L. Keys, Hua Zhou, Kenneth Lange
Journal of Machine Learning Research
April 1, 2019

Single-shot autofocus microscopy using deep learning

Henry Pinkard, Zachary Phillips, Arman Babakhani, Daniel A. Fletcher, Laura Waller
bioRxiv.org
March 23, 2019

Resistance to Adoption of Best Practices

Dan Sholler, Sara Stoudt, Chris Kennedy, Fernando Hoces de la Guardia, François Lanusse, Karthik Ram, Kellie Ottoboni, Marla Stuart, Maryam Vareth, Nelle Varoquaux, Rebecca Barter, R. Stuart Geiger, Scott Peterson, Stéfan van der Walt
SocArXiv
March 12, 2019

Best Practices for Managing Turnover in Data Science Groups, Teams, and Labs

Dan Sholler, Diya Das, Fernando Hoces de la Guardia, Chris Hoffman, François Lanusse, Nelle Varoquaux, Rolando Garcia, R. Stuart Geiger, Shana McDevitt, Scott Peterson, Sara Stoudt
SocArXiv
March 5, 2019

Optimal orientations of discrete global grids and the Poles of Inaccessibility

Richard Barnes
International Journal of Digital Earth
February 14, 2019

OPENMENDEL: A Cooperative Programming Project for Statistical Genetics

Hua Zhou, Janet S. Sinsheimer, Christopher A. German, Sarah S. Ji, Douglas M. Bates, Benjamin B. Chu, Kevin L. Keys, Juhyun Kim, Seyoon Ko, Gordon D. Mosher, Jeanette C. Papp, Eric M. Sobel, Jing Zhai, Jin J. Zhou, Kenneth Lange
arXiv.org
February 14, 2019

Deep learning for cell image segmentation and ranking

Flávio H.D. Araújo, Romuere R.V. Silva, Daniela M. Ushizima, Mariana T. Rezende, Cláudia M. Carneiro, Andrea G. Campos Bianchi, Fátima N.S. Medeiros
Computerized Medical Imaging and Graphics
February 11, 2019

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