Publications

Slingshot: cell lineage and pseudotime inference for single-cell transcriptomics

Kelly Street, Davide Risso, Russell B. Fletcher, Diya Das, John Ngai, Nir Yosef, Elizabeth Purdom and Sandrine Dudoit
BMC Genomics
June 18, 2018

Career Paths and Prospects in Academic Data Science: Report of the Moore-Sloan Data Science Environments (MSDSE) Survey

R. Geiger, Charlotte Mazel-Cabasse, Chihoko Cullens, Laura Norén, Brittany Fiore-Gartland, Diya Das, Henry Brady
SocArXiv
June 6, 2018

No reproducibility without preproducibility

Philip B. Stark
Nature
May 31, 2018

The Types, Roles, and Practices of Documentation in Data Analytics Open Source Software Libraries; A Collaborative Ethnography of Documentation Work

R. Stuart Geiger, Nelle Varoquaux, Charlotte Mazel-Cabasse, and Chris Holdgraf
Computer Supported Cooperative Work (CSCW)
May 29, 2018

Determining the Performance of Future High-energy Space Missions with MEGAlib

Andreas Zoglauer
2018 HEAD Meeting: High Energy Astrophysics in the 2020’s and Beyond
March 20, 2018

clusterExperiment and RSEC: A Bioconductor package and framework for clustering of single-cell and other large gene expression datasets

Davide Risso, Liam Purvis, Russell Fletcher, Diya Das, John Ngai, Sandrine Dudoit, Elizabeth Purdom
bioRxiv.org (preprint)
March 12, 2018

Reverse image search for scientific data within and beyond the visible spectrum

Flavio H.D. Araujo, Romuere R.V. Silva, Fatima N.S. Medeiros, Dilworth D.Parkinson, Alexander Hexemer, Claudia M.Carneiro, Daniela M.Ushizima
Expert Systems with Applications
March 12, 2018

Next Steps for the Colorado Risk-Limiting Audit (CORLA) Program

Mark Lindeman, Neal McBurnett, Kellie Ottoboni, Philip B. Stark
arXiv.org (preprint)
March 2, 2018

How to Encourage Data-Driven Discovery

Ed Lazowska, Rich Bonneau, Juliana Freire, Mik Laver, Henry Brady, Cathryn Carson, David Culler, Jonathan Dugan, Marsha Fenner, Saul Perlmutter, Magda Balazinska, Micaela Parker and Sarah Stone
Chronicle of Higher Education
March 4, 2018

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