Publications

clusterExperiment and RSEC: A Bioconductor package and framework for clustering of single-cell and other large gene expression datasets

Davide Risso, Liam Purvis, Russell Fletcher, Diya Das, John Ngai, Sandrine Dudoit, Elizabeth Purdom
bioRxiv.org (preprint)
March 12, 2018

Reverse image search for scientific data within and beyond the visible spectrum

Flavio H.D. Araujo, Romuere R.V. Silva, Fatima N.S. Medeiros, Dilworth D.Parkinson, Alexander Hexemer, Claudia M.Carneiro, Daniela M.Ushizima
Expert Systems with Applications
March 12, 2018

Next Steps for the Colorado Risk-Limiting Audit (CORLA) Program

Mark Lindeman, Neal McBurnett, Kellie Ottoboni, Philip B. Stark
arXiv.org (preprint)
March 2, 2018

How to Encourage Data-Driven Discovery

Ed Lazowska, Rich Bonneau, Juliana Freire, Mik Laver, Henry Brady, Cathryn Carson, David Culler, Jonathan Dugan, Marsha Fenner, Saul Perlmutter, Magda Balazinska, Micaela Parker and Sarah Stone
Chronicle of Higher Education
March 4, 2018

Injury Activates Transient Olfactory Stem Cell States with Diverse Lineage Capacities

Levi Gadye, Diya Das, Michael A. Sanchez, Kelly Street, Ariane Baudhuin, Allon Wagner, Michael B. Cole, Yoon Gi Choi, Nir Yosef, Elizabeth Purdom, Sandrine Dudoit, Davide Risso, John Ngai, Russell B. Fletcher
Cell Stem Cell
December 7, 2017

A recurrent neural network for classification of unevenly sampled variable stars

Brett Naul, Joshua S. Bloom, Fernando Pérez and Stéfan van der Walt
Nature Astronomy
November 27, 2017

The Practice of Reproducible Research

Justin Kitzes, Daniel Turek, Fatma Deniz 
University of California Press
November 2017

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